Consulting
I provide independent scientific consulting in structural biology, spanning experimental model building in cryo-EM and macromolecular crystallography (MX) and modern AI-based structure prediction. I support academic and biotech projects that need careful model building and interpretation, method development, or scalable computational workflows.
With 20+ structures deposited in the PDB, and as a developer of CCP4 and CCP-EM — the leading crystallography and cryo-EM software suites — I bring hands-on experimental expertise alongside large-scale AI-based prediction and validation.
Scope of services
Typical areas of support include:
- Cryo-EM and crystallographic (MX) model building, rebuilding, and refinement
- Validation and interpretation of experimental and predicted structural models
- AI-based protein structure and protein–protein complex prediction
- Structural analysis to support experimental target selection and prioritisation
- Large-scale inference campaigns and benchmarking studies
- Design and deployment of reproducible structure-prediction workflows for HPC and cloud environments
- Method development in structural bioinformatics and model validation
- Hands-on workshops and training in cryo-EM, crystallography (MX), and AI-based structure prediction
Training and workshops
With over 10 years of teaching at CCP4 and CCP-EM workshops, I organise and teach hands-on training covering cryo-EM, macromolecular crystallography (MX), and AI-based structure prediction — for research groups, facilities, and training schools. Sessions can be tailored to a team’s experience level and tools, from introductory model interpretation to advanced model building and prediction workflows.
Example deliverables
Depending on project scope, deliverables may include:
- Built, rebuilt, or refined experimental models with validation assessments
- Annotated structural model sets with confidence and validation metrics
- Concise technical reports supporting experimental decision-making
- Comparative analyses of alternative structural hypotheses
- Reproducible computational workflows or pipelines
- Feasibility or benchmarking assessments for AI-based modelling approaches
- Accessible protein structure prediction pipelines for HPC and cloud environments, suitable for non-specialist users
Examples are drawn from recent academic collaborations and early-stage biotech projects.
Engagement models
Engagements are typically structured as:
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Short advisory engagements Focused discussions, data or model review, and strategic input
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Project-based work Defined scope and deliverables, with fixed or capped budgets
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Retainer arrangements Reserved consulting capacity for ongoing collaboration across project phases
Details are agreed in advance based on scope and computational requirements.
Practicalities
- Location: Hamburg, Germany (remote work by default)
- Availability: project-based and advisory engagements
- Cloud compute costs are handled separately from consulting fees
